Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEINIYQNPGQSLANIYKGFARQCNPGFVFPEAQTIEAWDIPLRLHPEFIPGGDISKADQQYSTLLAQEIANGVTIGFRMVNEKERVCNVEILPLLTSMAQNLDRIKARFGSGYLDRFKGSPNVYPTDVGFSTDASGGISQESGLLVSYGVNLRTLTPGTWQAMTLPEDIKALVG--PGVGLRLDAPNFSDVFNTIKSGLRYTTAVTLLLAYFAAI |
| 4DHG Chain:A ((171-263)) | ---------------------------------------------------------------------------------------------------------------------KWAGHPGKPEDRFGPALDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAFPGLPLRLD-PNAA---WTVETSIRVGRALDGVLEYLEDP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23720 for 549 contacts (-43.2/contact) +
2D Compatibility (PS) -9679 + (NN) -1260 + (LL) 8060
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -32799.0 ( -59.74 by residue)
QMean score : 0.146
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