Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPELRIRPRFYEPDVQRMAAPLGELFAAVG--------------VRFVQG-SAQRIDVAGKRVEYRDAEGTLAQLDYDRLVLAAGSGVWRPASVAGIDAA----FDVDQLEDALRLEAHLHALRDLPDSPARNTVVVAGGGFTGIETATEMPARLRAILGEKAALRVIVVDRGAAIGA-SMGADLSGLIAEASAELGVEWCLGRSVAAVDAEGVTLDDGQRIEAKTVVWTVGVRASTLTGQIPGERDAQGRLHVDRNLKVLGLDDVYATGDVARAATDDLGNHALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKKIKTEINGVWIYPPAADRAVALAAADPLIPVVA |
| 4H4X Chain:A ((6-276)) | LKAPVVVLGAGLASV-SFVAELRQAGYQGL----ITVVGDEAE---RP-YDRP-------PLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGR----TLPYGTLVLATGAA---PRALPTLQGATMPVHTLRTLEDARRIQAGLRP---------QSRLLIVGGGVIGLELAAT---------ARTAGVHVSLVARGPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACDDG-IFVDAYGRTT-CPDVYALGDVTR----------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4H4X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -155619 for 1986 contacts (-78.4/contact) +
2D Compatibility (PS) -26559 + (NN) -1802 + (LL) 10748
1D Compatibility (HY) -18400 + (ID) 4400
Total energy: -196032.0 ( -98.71 by residue)
QMean score : 0.477
|
|
|