Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGYDLAADDLKNAYEQALGQYSGLPPYDRLIEEPAS
3NA7 Chain:A ((7-56))
-----LKQLIEISHLDKEIDSLEPLIRE-KRKDLDKALNDKEAKNKAILNLEEEKL---------------------
General information:
TITO was launched using:
RESULT:
Template:
3NA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3427 for 193 contacts (17.8/contact) +
2D Compatibility (PS) -5668 + (NN) -5044 + (LL) 1008
1D Compatibility (HY) 800 + (ID) 200
Total energy: -5677.0 ( -29.41 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_3NA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NA7-query.scw
PDB file :
Tito_Scwrl_3NA7.pdb
: