Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFSEKWLRSWANPQVSHDELVARLSMVGLEVDADLPVAGAFSGVVVGEVLSTEQHPDADKLRVCQVSNGSETFQVVCGAPNVRAGLKIPFAMIGAELPD-DFKIKKAKLRGVESFGMLCSAKELQISEENAGLLELPADA-PVGQDVRTYLELADYTIEVGLTPNRGDCLSLAGLAREVSAIYDVPLAPVAVDAVAAQHDETRPVELAA----PAACPRYLGRVIRNVDLSRPTPLWMVERLRRSDIRSIDPVVDVTNYVMIELGQPMHAFDLAEINGGVRVRMAEDGEKLVLLDGQEITLRADTLVIA----DHQRALAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTDSSHRFERGVDSQLARKAMERATRLILDIVGGEPGPIVEQVSEAHLPKVA-PITLRAERVTQMLGMPLDAAEIVRLLQALELTVVADGEG-QWSVGVPSHRFDISLEVDLIEELARLYGYNRLPVRYPQARLAPNN-------KPEARAALPLLRRLLVARGYQEAITFSFIDPALFELFDPGTQPLTLANPISADMAAMRSSLWPGLVKALQHNLNRQQ-SRVRLFESGLRFVGQLEGLKQEAMLAGAICGKRLPEGWANGRDGVDFFDAKADVEAVLASAGALGDFSFVPGEHPALHPGQTARIEREGRLVGYLGALHPELAKKLDLEQPVFLFELLLAEVVDGHLPKFRELSRFPEVRRDLALLVDQDVPAQDILTQIRAAAGEWLTDLRLFDVYHGKGIDPHRKSLAVGLTWQHPSRTLNDDEVNSTTQNIVTSLEERFNATLRK |
1B7Y Chain:B ((1-775)) | MRVPFSWLKAYVPELESPEVLEERLAGLGFETDRIERVFPIPRGVVFARVL--EAHPIPGTRLKRLVLDAGRTVEVVSGAENARKGIGVALALPGTELPGLGQKVGERVIQGVRSFGMALSPRELGVGEYGGGLLEFPEDALPPGTPLSEAWP-EEVVLDLEVTPNRPDALGLLGLARDLHA-----LGYALVEPEAALKAEALPLPFALKVEDPEGAPHFTLGYAFGLRVA-PSPLWMQRALFAAGMRPINNVVDVTNYVMLERAQPMHAFDLRFVGEGIAVRRAREGERLKTLDGVERTLHPEDLVIAGWRGEESFPLGLAGVMGGAESEVREDTEAIALEVACFDPVSIRKTARRHGLRTEASHRFERGVDPLGQVPAQRRALSLLQALAGAR---VAEALLEAGSPKPPEAIPFRPEYANRLLGTSYPEAEQIAILKRLGCRV--EGEGPTYRVTPPSHRLDLRLEEDLVEEVARIQGYETIPLALPAFFPAPDNRGVEAPYRKEQR-----LREVLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLFE-----VGRVFREREETHLAGLLFGEGVGLPWAKERLS-GYFLLKGYLEALFARLGL--AFRVEAQAFPFLHPGVSGRVLVEGEEVGFLGALHPEIAQELEL-PPVHLFELRLP-LPDKPL-AFQDPSRHPAAFRDLAVVVPAPTPYGEVEALVREAAGPYLESLALFDLYQGPPLPEGHKSLAFHLRFRHPKRTLRDEEVEEAVSRVAEALRAR------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1B7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -391638 for 5944 contacts (-65.9/contact) +
2D Compatibility (PS) -79951 + (NN) -23015 + (LL) 2016
1D Compatibility (HY) -52800 + (ID) 15250
Total energy: -560638.0 ( -94.32 by residue)
QMean score : 0.415
|
|
|