Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLKRDPLERAFLRGYQNGITGKSRDLCPFTHPTTRQSWLNGWREGRGDNWDGLTGTAGLQRLNQLQHV
2VOF Chain:B ((13-24))
--RRIADDLNAQYE--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VOF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -585 for 38 contacts (-15.4/contact) +
2D Compatibility (PS) -1235 + (NN) 1030 + (LL) 1988
1D Compatibility (HY) 0 + (ID) 150
Total energy: 1048.0 ( 27.58 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_2VOF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VOF-query.scw
PDB file :
Tito_Scwrl_2VOF.pdb
: