Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFNRVVCGKLSWFIQAGGSMPSLIMDIALSGERLQAIYGGRANRVLLRSRDGRRVNLPAHHLRPFIGHDGVHGTFRLDFSEDGRLLALQRLA
4B5E Chain:A ((34-88))
----------MGWFRQAPGKERDVVAAINLNGGRTYSADSVKGRFTISRDNDKNTVYLQMSNLKP----------------------------
General information:
TITO was launched using:
RESULT:
Template:
4B5E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25782 for 293 contacts (-88.0/contact) +
2D Compatibility (PS) -5800 + (NN) -2728 + (LL) 2424
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -33836.0 ( -115.48 by residue)
QMean score : 0.124
(partial model without unconserved sides chains):
PDB file :
Tito_4B5E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B5E-query.scw
PDB file :
Tito_Scwrl_4B5E.pdb
: