Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLQRGFTLLELLIAIAIFALLALATYRMFDSVMQTDQATRVQEQRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFL--------SEGENDQIVEFTRGGWRNPLG-QARSRLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHNWQGHWPTDEGSEEERLESLPLAVEMTLEHRHYGKLVRVWRLLDPPLKQDQPQGQPGGENGENGEGGVPQPPEGMPGAPE |
| 2RET Chain:B ((9-173)) | -------------------------------------ELSQERTARLNELQRALVMMDSDFRQIALRQTRT-----SKKLLHWADYLLDS---DNKGIMFARLGWHNPQQQFPRGEVTKVGYRIKDERLERVWWRYPDTP--QEGVVTPLLSDVEELNVRFYDG-KQWINEWSNEL--------TLPAAISVELTLKDYGKIARTYLTPEGNLQ-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34093 for 995 contacts (-34.3/contact) +
2D Compatibility (PS) -15958 + (NN) -5785 + (LL) 4020
1D Compatibility (HY) -9200 + (ID) 2150
Total energy: -63166.0 ( -63.48 by residue)
QMean score : 0.298
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