Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKRLLIAACTLLFAGSLLAATPA---AKPHVLIATSLGEIEVELDPAKAPISVKNFLEYVDSGYYDGTLFHRVIPGFMVQ------TGGFSAGMQEKKTRAPIKNEADNGL-LNERGTLAMARTGVVDSATSQFFINLTDNDFLNHGARDFGYAVFGKVVRGMGVVDQIAKVPTTRRNGFADVPSDDVVILSAKRL
2K7N Chain:A ((1-162))
------------------MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQ----FEDELHPDLKFTGAGILAMANAG-PDTNGSQFFVTLAPTQWL-----DGKHTIFGRVCQGIGMVNRVGMVETNSQ----DRPVDDVKIIKA---
General information:
TITO was launched using:
RESULT:
Template:
2K7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77783 for 1134 contacts (-68.6/contact) +
2D Compatibility (PS) -16373 + (NN) -5128 + (LL) 2852
1D Compatibility (HY) -13200 + (ID) 3200
Total energy: -112832.0 ( -99.50 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_2K7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K7N-query.scw
PDB file :
Tito_Scwrl_2K7N.pdb
: