Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNRQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQADEVQVV
3I2Z Chain:B ((6-69))
------GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVTAL
General information:
TITO was launched using:
RESULT:
Template:
3I2Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31811 for 427 contacts (-74.5/contact) +
2D Compatibility (PS) -6719 + (NN) -2988 + (LL) 240
1D Compatibility (HY) -5600 + (ID) 1900
Total energy: -48778.0 ( -114.23 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_3I2Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I2Z-query.scw
PDB file :
Tito_Scwrl_3I2Z.pdb
: