Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTN-NGNTADAAYFRRAYLEFGGTA--YRDWKYQINYDLSRN--------VGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLEKA-TSSKWVTALERNLTY--D----IA-DWVNDNVGTGIQASS-VVGGMAFLSGSVFSENNND--TDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGAFSAQAEYLRRTVKAERDREDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYANEAVKVSANYVKAKTDKISNA------------NGDDSGDGLVMRLQYVF |
| 2FGQ Chain:X ((3-332)) | --------------------------------------------------------SVTLFGIVDTNVAYVNKDAAGDSRYGLGTSGASTSRLGLRGTEDLGGGLKAGFWLEGEIFGDDGNASGFNFKRRSTVSL-----S-GNFGEVRLGRDLVPTSQKLTSYDLFSATG-IGPFMGFRNWAAGQGADDNGIRANNLISYYTPNFGGFNA-GFGYAFDEKQTIGTADSVGRYIGGYVAYDN-----GPLSASLGLAQQKTAV---------------------------------------GGLATDRDEITLGASYNFGVAKLSGLLQQTKFKRDI-GGDIKTNSYMLGASAPVGG------------------V-----GEVKLQYALYDQKAI------------DSKAHQITLGYVHNLSKRTALYGNLAFLKNKDASTLGLQAKGVYAGGVQAGESQTGVQVGIRHAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 92715 for 2344 contacts (39.6/contact) +
2D Compatibility (PS) -30293 + (NN) 2628 + (LL) 6460
1D Compatibility (HY) 0 + (ID) 2050
Total energy: 69460.0 ( 29.63 by residue)
QMean score : 0.129
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