Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAITALPSADGQELTIQIQGRFDFGAHQDFRDAYERVAITPRRYVVDLRNATYLDSSALGMLLLLRDHAGGENAQISLANCSPEVRKILAISNFEQLFKIS
5DA0 Chain:A ((397-454))
--VTPVDEVDGTR-TYRVRGQLFFVSTHDFLHQFD-FTHPARRVVIDLSDAHFWDGSAVGAL---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5DA0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18652 for 320 contacts (-58.3/contact) +
2D Compatibility (PS) -5980 + (NN) 568 + (LL) 3600
1D Compatibility (HY) -6000 + (ID) 950
Total energy: -27414.0 ( -85.67 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_5DA0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5DA0-query.scw
PDB file :
Tito_Scwrl_5DA0.pdb
: