Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPAAAAAEVGVVGVQELPHDLALAA
4O6T Chain:A ((2-183))
-SISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSATLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPA----------------------
General information:
TITO was launched using:
RESULT:
Template:
4O6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120699 for 1494 contacts (-80.8/contact) +
2D Compatibility (PS) -19998 + (NN) -15540 + (LL) 2324
1D Compatibility (HY) -21200 + (ID) 9050
Total energy: -184163.0 ( -123.27 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_4O6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O6T-query.scw
PDB file :
Tito_Scwrl_4O6T.pdb
: