Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPLTLIATITAAPG--HAEALERELRALVAPSRAEAGCLQYDLHQDRHDSHLF--------YMIEQWRDDAALERHQNTEHFLRFSRG--NEALLQNVKIDQLYRLA
1TUV Chain:A ((2-101))
----LTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQ-----
General information:
TITO was launched using:
RESULT:
Template:
1TUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26746 for 521 contacts (-51.3/contact) +
2D Compatibility (PS) -9705 + (NN) -4130 + (LL) 780
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: -47801.0 ( -91.75 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1TUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TUV-query.scw
PDB file :
Tito_Scwrl_1TUV.pdb
: