Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPVLPEQAQEALDAFGHTASWEQRARLLLQWGERLA---PLAEHERQEEHRVHGCESLVWLLGEQRDG---HWRFRADSDARLIRGLLAVLLARVDGIETRELARLDLNDWFTCLGLSRQLSPSRSNGLNAVLQRMRELAGQTAG
2QQ4 Chain:A ((11-96))
---------------------------ILLDHYQSPRNFGVLPQATKQAGGMNPSCGDQVEVMVLLEGDTIADIRFQGQG-CAISTASASLMTEAVKGKKVAEALELSR-KFQAM-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33074 for 491 contacts (-67.4/contact) +
2D Compatibility (PS) -8398 + (NN) -2092 + (LL) 3640
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -42124.0 ( -85.79 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_2QQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QQ4-query.scw
PDB file :
Tito_Scwrl_2QQ4.pdb
: