Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTLLALDTSTEACSVALLHEGRALSHYEVIPRLHAQRLLPMVRDLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILAQRAYREQGAERVAAAIDARMDEVYWGCYQLQ-QGEMRLAGSEAVLPPERVAVPWDAAAADWFGAGTGWGYVERMPQRP--VALDASL-LPHAEDLLSLAGFAWARGEGVEAEQALPVYLRDNVATPKKAP
3ZEU Chain:A ((3-226))
---ILAIDTATEACSVALWNNGTINAHFELCPREHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGAWRKTGATRVLAAIDARMGEVYWAEYQRDAQGVWQGEETEAVLKPERVGERLKQLSGEWATVGTGWSAWPDLAKECGLTLHDGEVSLPAAEDMLPIASQKLAAGETVAVEHAEPVYLRNEVAWKK---
General information:
TITO was launched using:
RESULT:
Template:
3ZEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -182004 for 1935 contacts (-94.1/contact) +
2D Compatibility (PS) -22847 + (NN) -3683 + (LL) 300
1D Compatibility (HY) -17600 + (ID) 5550
Total energy: -231384.0 ( -119.58 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_3ZEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZEU-query.scw
PDB file :
Tito_Scwrl_3ZEU.pdb
: