Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASHELDYRILGESMQTVEIELDPGETVIAEAGAMNYMTGDIRFTARMGDGSDGSLLGKLWSAGKRKLGGESVFMTHFTNEGQGKQHVAFAAPYPGSVVAVDLDDVGGRLFCQKDSFLCAAYGTRVGIAFTKRLGAGFFGGEGFILQKLEGDGLVFVHAGGTLIRRQLN-GETLRVDTGCLVAFTDGIDYDVQLAGGLKSMLFGGEGLLLTTLKGSGTVWLQSLPFSRLAGRIYDATFRAREEVRTNNG |
2LOJ Chain:A ((33-61)) | ---------------------------------------------------------------------------------------------------------------------------------------------------LLGPDGKVIIDHNGQEYLLRKTQAGKLLL------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4170 for 119 contacts (-35.0/contact) +
2D Compatibility (PS) -3267 + (NN) -2220 + (LL) 11832
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 275.0 ( 2.31 by residue)
QMean score : 0.318
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