Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALQRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFFAATEVCERIR
4HR2 Chain:A ((5-145))
MALERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVAARMAHLSRADAEKFYAVHAERPFFKDLVEFMISGPVMIQVLEGEDAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETARVEIAFFFPEMNVYSR--
General information:
TITO was launched using:
RESULT:
Template:
4HR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49047 for 1093 contacts (-44.9/contact) +
2D Compatibility (PS) -14781 + (NN) -2049 + (LL) 304
1D Compatibility (HY) -16000 + (ID) 5000
Total energy: -86573.0 ( -79.21 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_4HR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HR2-query.scw
PDB file :
Tito_Scwrl_4HR2.pdb
: