Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAYDIEIVNDAAHAGEANHGWCFGLPPGIRPEQWPLDPDTGYPLMHGFTLLLPEDYRVHGPEIVALSFFSLAPDQNDGGPTSVDGIREMLIDPPAQPPAEAELRPFWEAGRNSHPRLHRMEDILGGAYALILLDAAEFSGAPCQPRALPAGNPLLAQTEPPQWLEAGSAASFVPDWAEDDYYLLRALGGRPAAGHQQRYPLRWTARAQDPNAGVVPSEYGDGGYQLPHYWLDGKIERDNYREHPWVEGHLPNHIGGTMRPVQGVPEMSPFYVEFEEYLGGYNFGGGNAQLDFRDMRFDWACG |
| 3TVK Chain:A ((6-43)) | ------------------------------------MDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2514 for 138 contacts (-18.2/contact) +
2D Compatibility (PS) -4156 + (NN) -3704 + (LL) 10884
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -1440.0 ( -10.43 by residue)
QMean score : -0.154
|
|
|