Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPHRETPQVSAAQ-RLAMVERAVAGVERLTVDPRELQRDKPSYTIDTLESVRAELAADDQLFMLIGWDAFCGLPTWHRWEALLDHCHIVVLQRPDADSEPPESLRDLLAARSVADPQALKGPGGQITFVWQTPLAVSATQIRALLGAGRSVRFLVPDAVLNYIEAHHLYRAPH
2QTR Chain:A ((2-189))
--RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKY-PDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGY------KLRTPYPITTVEIPE----------------FAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES--
General information:
TITO was launched using:
RESULT:
Template:
2QTR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144310 for 1477 contacts (-97.7/contact) +
2D Compatibility (PS) -20037 + (NN) -9888 + (LL) 524
1D Compatibility (HY) -17200 + (ID) 3400
Total energy: -194311.0 ( -131.56 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_2QTR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTR-query.scw
PDB file :
Tito_Scwrl_2QTR.pdb
: