Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLENRVALVTGAGQGIGRAIAECFAAEGARVLLATRTASRGQAVLEAIRLGGGTAELLAVDLSEYDAARRAVSATLERFGQLDILLHNAAAFPQCALAELDEGTLERTLAVNLKSCFRLTQAALPALRRSVAGRVLVTSSVTGPRTAIPGLSHYAASKAGVNGFIRAAALELAGDGITVNGVEPGLVATPALGSLGDA--AALAAHIPLGRVGQPLDIAHAMLFLASDEASYITGQTLVVDGGALLPENGGLA
3U09 Chain:A ((9-250))
--NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL---GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGT-MGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYM-------
General information:
TITO was launched using:
RESULT:
Template:
3U09.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160001 for 2058 contacts (-77.7/contact) +
2D Compatibility (PS) -26519 + (NN) -11354 + (LL) 372
1D Compatibility (HY) -14400 + (ID) 4800
Total energy: -216702.0 ( -105.30 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3U09.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U09-query.scw
PDB file :
Tito_Scwrl_3U09.pdb
: