Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MNLLKSLAAVS--------SITMLSRVLGFVRDTILARIFGAGLATDAFFVAF-------------------------KLPNLLRRIFAEGAFSQAFVPILAEYKNQQGEEATRTFIAYVSGLLTLVLALVTALGILA---APWVIWVTA------PGFADTPEKFALTTDLLRVTFPYILLISLSSLAGAILNTWNRFSVPAFVPTLLNVAMIGFALFL-------TPYFDPPVMVLGWAVLAGGLLQLLYQLPHLRKIGMLVLPRLNLRDSGVWRVMKLMLPAILGVSV------------SQISLIINTIFASFLAAGS-----------VSWMYYADRLMELPSGVLGVALGTILLPMLAKTYS-------NKDRHEYSRLLDWGLRLCF-LLVLPCSLALAILAEPLTVSL--FQYGKFTTVDAAMTQRALVAYSVGLLGIILVKVLAPGFYAQQNIRTPVKIAL------FTLVSTQLMN------LAFIGPLQHAGLALSI--------GLAACLNAGLLYWQLRKQRLYLPQPGWAKFLVKLVVAVL-AMSAVLLATM----HWLPAWE--QGAMLERFLRLGLLVVAGLLAYFGMLALLGFRLRDFSRRAVL--- |
| 5CA8 Chain:A ((27-687)) | DAIQIIDENKHFNTGILDYINKTSPADVGNNYHIISVFGSQSTGKSTLLNRLFNTNFDVMGIWLAYSPVVSTTLGHTTSKSNILVMDVEGTDEDQDFERKAALFALSTSEVLIINIWETQVGLYQGAN-MGLLKTVFEVNLSLFGKSKLETHNDHKVLLLIVIRDHVGVTPVESLAKTFTLDLQNMWSSLAKPAELEHLQFADFFDVTFHALNHKVLQPKEFGEGINRLGDRLVVSNELFKPEYHHDVPIDGWTMYAERCWEQIETNKDLDLPTQQILVAQFKCDEIVESVFQEFLTKYQHHFKEVDAAPDFEELGALFADLRQDAFEDYDASASRYNKAVYEQKRKKLRWLINDKLKEVFDVHAKNLCNTLLEKFEKDLVALKGKDFAVNVKTLSTKLVEDVNFQVSLMSLQGDLSLDEIILALTKDIDAIVAKQQVVELNSIVNKSVKKLSASLSKSIQFELGDPNEETWDNVLQQFKGVYEKFGGDFGLGTSSTQNQQAIEKFKFKSWCQFYDVTHKLISREKLLALLQDRFDDKFRYDENGLPKLYLNEQDLEKTFAVAKQHALQVLPILTFAKLADGSEIVPDYDIFDSKLREQFLDHCFAEIITEQEKLEVLAKFKKEVDAKYIETKRSIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -404629 for 3394 contacts (-119.2/contact) +
2D Compatibility (PS) -53689 + (NN) -15532 + (LL) 132
1D Compatibility (HY) -14000 + (ID) 3800
Total energy: -491518.0 ( -144.82 by residue)
QMean score : 0.217
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