Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAKDLEKAQAAFTAAVPVIDRMADKGIIHKNKAARHKSRLSGHIKALSTAAA
1HNZ Chain:T ((11-96))
-----SALKRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAG
General information:
TITO was launched using:
RESULT:
Template:
1HNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23624 for 564 contacts (-41.9/contact) +
2D Compatibility (PS) -9351 + (NN) -4461 + (LL) 184
1D Compatibility (HY) -400 + (ID) 1600
Total energy: -39252.0 ( -69.60 by residue)
QMean score : 0.697
(partial model without unconserved sides chains):
PDB file :
Tito_1HNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HNZ-query.scw
PDB file :
Tito_Scwrl_1HNZ.pdb
: