Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQYVYTMHRVGKIVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDTEIEGEARPMPGINVGYLPQEPKLDPQATV--RDIVEEAVGQIKQAQARLDEVYA---------AYAEPDADFDALAAEQAKLEAILQASDGHNLERQLEVAADALRLPPWDAKVEHLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDADSVAWLEHFLHDFPGT--VVAITHDRYFLDNVAGWILELDRGHGIPFEGNYSGWL-ESKAARLAQEAKQEASHAKAMKAELEWVRQGAKGRQAKSKARLQRFEELQSQEFQKRSETNEIYIPAGPRLGDKVIELHNVTKGYGDRVLIDNLSLSIPKGAIVGVIGGNGAGKSTLFRMLTGKEQPDSGTI----------------EIGETVQIASVDQSRDSLEGNKTVWEQVSDGFEQIKIGNYEVPSRSYVGRFNFKGADQQKFVKDLSGGERGRLHLALTLKQGGNVLLLDEPSNDLDVE----TLRALEEALLDFPGAAIVISHDRWFLDRIATHILSYEDDGKVTFFEGNYTEFEADRKKRLGDAASQPHRVRYKKLA |
| 3OZX Chain:A ((28-460)) | ----------------------------------LGVLGKNGVGKTTVLKILAG-------EIIPNFG------------DPNSKVGKDEVLKRFRG--KEIYNYFKELYSNELKIVHKIQYVEYASKF-----LKGTVNEILTKIDERGKKDEVKELLNMTNL--WNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELLKNKYVIVVDHDLIVLDYLTDLI------HIIYGESSVYGRVSKSYAARVGIN--------NFLKGYLP--AENMKIRPDEIKFMLK-------------LKTKMKWTKIIKKLGDF-------------QLVVDNGEAK--EGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQILSYKPQRIFPNYDGTVQQYLENASKDALSTSSWFFEEVTK-------------------RLNLHRLLESN-VNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFK--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130367 for 3019 contacts (-43.2/contact) +
2D Compatibility (PS) -42911 + (NN) -32436 + (LL) 10640
1D Compatibility (HY) -25200 + (ID) 6000
Total energy: -226274.0 ( -74.95 by residue)
QMean score : 0.417
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