Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTETLVSGTTPVSDNANLKQHLTTPTQEGQTLRDSVEKALHNYFAHLEGQPVTDVYNMVLCEVEAPLLETVMNHVKGNQTKASELLGLNRGTLRKKLKQYDLL
3JRD Chain:A ((27-97))
--------------------------------LRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGM-
General information:
TITO was launched using:
RESULT:
Template:
3JRD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25670 for 370 contacts (-69.4/contact) +
2D Compatibility (PS) -7684 + (NN) -4493 + (LL) 1668
1D Compatibility (HY) -8800 + (ID) 2200
Total energy: -47179.0 ( -127.51 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_3JRD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JRD-query.scw
PDB file :
Tito_Scwrl_3JRD.pdb
: