Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHRASHHELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYG-NALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELID-VDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLM--LVTYGNPQL--RDDARLARLGVRVV-VNGHAAYFAAIKATYDCLREE---RGAVASDLTASELSKK---YTFPEEYQAWARDYMEVKE |
1UJQ Chain:A ((4-286)) | ------HSPGQAFRAALAKENPLQIVGAINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCPLPLLVDADIGFGSSAFNVARTVKSIAKAGAAALHIEDQV----------AIVSKEEMVDRIRAAVDARTDPNFVIMARTDALAVEGLEAALDRAQAYVDAGADMLFPEAITELSMYRRFADVAQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEKVYTVLRQEGTQKNVIDIMQTRNELYESINYYQFEEKL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160720 for 2062 contacts (-77.9/contact) +
2D Compatibility (PS) -27978 + (NN) -10089 + (LL) 2312
1D Compatibility (HY) -14400 + (ID) 4050
Total energy: -214925.0 ( -104.23 by residue)
QMean score : 0.541
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