Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLQPVRLVSFVTTDLAGITRGRSLPLATLEEQLASGCGWVPANSSLTPQDLIDESSPWGSHGDLRLLPDPNSRVRVEQGPDAAAPALD---YLHGNLVETDGTPWPACPRSLLRAEVERYRDSGLQVIAAF--EHEFSLLGLPG--ERPAAAF------------------------SLQAQRAAGQFP-----------GWLVSALAQAGTEPEMFLPEYGQR------QYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNREAALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLRALADVDPHGLSDEERQARGIQALPATLGDALDCLQRDEALCAE---LPKPLLDTYLAMKRHELALTAGLSDDDLCRHYAELY |
| 2WGS Chain:A ((24-464)) | ----EKVEYVDVRFCDLPGIMQHFTIPASAFDKSVFDD-GLAFDGSSIRGFQ----S-------DMLLLPDPET-ARID--PFRAAKTLNINFFVHDPFTLE---PYSRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAATEADGSPNRGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSG-----FILEKGHHEVGSGGQAEINYQFNSLLHAADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLW-KDGAPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQRNRSACVRI-PI--TGSNPKAKR--LEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAPVDKD----------AASIPQTPTQLSDVIDRLEADHEYLTEGGVFTNDLIETWISFKR---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181895 for 3002 contacts (-60.6/contact) +
2D Compatibility (PS) -39743 + (NN) -20916 + (LL) 2788
1D Compatibility (HY) -17600 + (ID) 6100
Total energy: -263466.0 ( -87.76 by residue)
QMean score : 0.468
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