Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLWLALGPFPAMENQVLVIRIKIPNSGAVDWTVHSGPQLLFRDVLDVIGQVLPEATTTAFEYEDEDGDRITVRSDEEMKAMLSYYYSTVMEQQVNGQLIEPLQIFPRACKPPGERNIHGLKVNTRAGPSQHSSPAVSDSLPSNSLKKSSAELKKILANGQMNEQDIRYRDTLGHGNGGTVYKAYHVPSGKILAVKVILLDITLELQKQIMSELEIL-YKCDSSYIIGFYGAFFVENRISICTEFMDGGSLDVYR-------KMPEHVLGRIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGE---QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDSPVLPVGEFSEPFVHFITQCMRKQPKERPAPEELMGHPFIVQFNDGNAAVVSMWVCRALEERRSQQGPP |
| 3FME Chain:A ((3-275)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR---NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDF--------------AGCKPYMAPERINPELNQ-YSVKSDIWSLGITMIELAILRFPYDSW------GTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLILG---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185943 for 1825 contacts (-101.9/contact) +
2D Compatibility (PS) -26261 + (NN) -14912 + (LL) 12072
1D Compatibility (HY) -20800 + (ID) 5700
Total energy: -241544.0 ( -132.35 by residue)
QMean score : 0.492
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