Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
4OOP Chain:B ((30-165))
-----------KVKKLS--EKAVIPTRGSPLSAGYDLSSAVDSKVPAR--GKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDV--GAGVIDADYRGPVGVILFNHSDADFEVKFGDRIAQLIIEKI--VTPDVVEVDDLDETVRGDGGFGSTGV
General information:
TITO was launched using:
RESULT:
Template:
4OOP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76419 for 886 contacts (-86.3/contact) +
2D Compatibility (PS) -14969 + (NN) -4396 + (LL) 1240
1D Compatibility (HY) -6000 + (ID) 3050
Total energy: -103594.0 ( -116.92 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_4OOP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OOP-query.scw
PDB file :
Tito_Scwrl_4OOP.pdb
: