Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQKPVDNITQIIGGTPVVKLRNVVDDNA--ADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKG-------AIKKAKELKEEHGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPV-----LSGGEPGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAKELGKGKTVVTVLPSNGERYLSTPLYSFDD
4PCU Chain:A ((75-388))---KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTP--ARFDSPSSHVGVAWRLKNEIPNSHIL---DQYRNASNPLAHYDTTADEILQQCDGK-LDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQELQEGQRCVVILPDSVRNYMT--------


General information:
TITO was launched using:
RESULT:

Template: 4PCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86036 for 2620 contacts (-32.8/contact) +
2D Compatibility (PS) -32621 + (NN) -20917 + (LL) 552
1D Compatibility (HY) -26000 + (ID) 6000
Total energy: -171022.0 ( -65.28 by residue)
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_4PCU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PCU-query.scw
PDB file : Tito_Scwrl_4PCU.pdb: