Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGH-FAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
1OU4 Chain:B ((2-230))
----TPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSK-VNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALE---
General information:
TITO was launched using:
RESULT:
Template:
1OU4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146476 for 1956 contacts (-74.9/contact) +
2D Compatibility (PS) -24087 + (NN) -4197 + (LL) 696
1D Compatibility (HY) -24800 + (ID) 6050
Total energy: -204914.0 ( -104.76 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1OU4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OU4-query.scw
PDB file :
Tito_Scwrl_1OU4.pdb
: