Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKERIVNLETLDFETSQEVSLRPNLWEDFIGQEKIKSNLQISICAAKKR-------QESLDHMLFFGPPGLGKTSISHIIAKEMETNIKITAAPMIEKS------GDLAAILTNL--QAKDILFIDEIHRLSPAIEEV---------LYPAMEDFRLDIIIGSGPAAQTIKIDLPPFTLIGATTRAGMLSNPLRDRFGMSFRMQFYSPSELSLIIKKAAAKLNQDIKEESADEIAKRSRGTPR-IALRLLKRVRDFALVKNSS-----LMDLSITLHALNELGVNELGFDEADLAYLSLLANAQGRPVGLNTIAASMREDEGTIEDVIEPFLLANGYLERTAKGRIATPKTHALLKIPTLNPQTLF |
| 3B9P Chain:A ((8-272)) | -------------LDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER---EASRRLKTEFLVEFDGLP-------------------RIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELN-ISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEKWS-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116686 for 1680 contacts (-69.5/contact) +
2D Compatibility (PS) -22963 + (NN) -4957 + (LL) 7028
1D Compatibility (HY) -6400 + (ID) 2100
Total energy: -146078.0 ( -86.95 by residue)
QMean score : 0.537
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