Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MKKVLIINGAKAFGHSGGKLNETLTHHAKKILESLGLEVDTTIVD-----------------------------KGYEKSQEVEKFFSADATIWQMPG-WWMGEPWIVKKYIDEVFTSGHGKLYASDGRSSQNPTKNYGKGGLMQGKKYMLSLTWNAPIEAFNDPSEFFEGVGVDVVYLHLHKAFQFLGLSALPTFICNDVMKNPQ-VEQYLNSLTVHLRQAFGK- |
1TIK Chain:A ((2-204)) | SLSKVLVLKSSILAGYS---QSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENG-----------PEGLVTGKKAIVITSRGGI----------HKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78036 for 1261 contacts (-61.9/contact) +
2D Compatibility (PS) -18530 + (NN) -5987 + (LL) 116
1D Compatibility (HY) -3200 + (ID) 1500
Total energy: -107137.0 ( -84.96 by residue)
QMean score : 0.509
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