Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMMQLATKSFKNVECVAFEGLLADLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPFISKV--
1B6T Chain:A ((3-159))
--KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA
General information:
TITO was launched using:
RESULT:
Template:
1B6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121105 for 1203 contacts (-100.7/contact) +
2D Compatibility (PS) -16461 + (NN) -2620 + (LL) 328
1D Compatibility (HY) -15200 + (ID) 3600
Total energy: -158658.0 ( -131.89 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_1B6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B6T-query.scw
PDB file :
Tito_Scwrl_1B6T.pdb
: