Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKPLVGINMK-----NYINTRAQTSEWLEATIPLLGNFSDVDTFIFPSMGTLETTANLLAGTSFGFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNLFHEKTSEIAKKIQLALDEKITPVVCVGEGI---RANDTNELKNALKKQIEALFDTIQVTQ--FKNVVLAYEPEWAIGKANSADTDYIESAHQALREIIRELGGDETL--VRIIYGGSVSKENAAEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG |
4BI6 Chain:A ((4-256)) | -RRPFIGGNFKCNGSLDFI--KSHVAAIAAHKIP-----DSVDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIA---QLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNNEKLGQCPNIDGFLVGGASLKPE-FMTMIDILTKTR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BI6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114552 for 2045 contacts (-56.0/contact) +
2D Compatibility (PS) -25877 + (NN) -8402 + (LL) 464
1D Compatibility (HY) -14400 + (ID) 4350
Total energy: -167117.0 ( -81.72 by residue)
QMean score : 0.509
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