Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVITYGTFDLLHWGHIHLLKRAKALGDYLIVAISSDEFNRIKHKEAYHSYEHRKLIIEAIRYVDEVIPENNWEQKRDDIEKYGIDVFVMGDDWEGEFDFLKDV-------CEVVYLP---RTEGISTSQIKDELK
1COZ Chain:A ((1-126))
MKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQKKQDIIDHNIDVFVMG-DDW-----EG-KFDFLKDQCEVVYLPRTE---GISTTKIKEEI-
General information:
TITO was launched using:
RESULT:
Template:
1COZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56249 for 842 contacts (-66.8/contact) +
2D Compatibility (PS) -12770 + (NN) -3691 + (LL) 288
1D Compatibility (HY) -15200 + (ID) 4450
Total energy: -92072.0 ( -109.35 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_1COZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1COZ-query.scw
PDB file :
Tito_Scwrl_1COZ.pdb
: