Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVHIEAKQGEIAETILLPGDPLRAKYIAETFLEDVVLFNQVRGMLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRDVVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGIEKGLSLKVGNVFSADRFYNDQLDK-QQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQTTFNDMIVVALEAAIK
1PW7 Chain:C ((5-234))
---HINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVL-
General information:
TITO was launched using:
RESULT:
Template:
1PW7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161457 for 1979 contacts (-81.6/contact) +
2D Compatibility (PS) -23931 + (NN) -4306 + (LL) 436
1D Compatibility (HY) -25200 + (ID) 6600
Total energy: -221058.0 ( -111.70 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_1PW7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PW7-query.scw
PDB file :
Tito_Scwrl_1PW7.pdb
: