Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MAIIFAKEDDLEEIISSHPK--ILLNFWAEWCAPCRCFWPTLEQFAE---MEEGNVQVVKINVDKQ--RALAQKFDVKGIPNSLVLVDGEIKGAIAGIVSCDELRSRFKSLAK
2TRX Chain:A ((1-108))
SDKIIHL-TDDSFDTDVLKAD-GAILVDFWAEWCGPCKMIAPILDEIADEYQ---GKLTVAKLNID--QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA
General information:
TITO was launched using:
RESULT:
Template:
2TRX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90117 for 673 contacts (-133.9/contact) +
2D Compatibility (PS) -10442 + (NN) 30 + (LL) 808
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: -108871.0 ( -161.77 by residue)
QMean score : 0.699
(partial model without unconserved sides chains):
PDB file :
Tito_2TRX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2TRX-query.scw
PDB file :
Tito_Scwrl_2TRX.pdb
: