Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDPIADIDTINLELILADLESINKRYARVEKMARTQKDKESVAEFNVLQKIKPVLEDGKSARTIEFTEEEAKVVKGLFLLTTKPVLYVANVDEDKVADPDDIDYVNQIRAFAETENAEVVVISARAEEEISELDDEDKLEFLEAIGLTESGVDKLTRAAYHLLGLGTYFTAGEKEVRAWTFKRGIKAPQAASIIHSDFERGFIRAVTMSYDDLIQYGSEKAVKEAGRLREEGKEYIVQDGDIMEFRFNV |
| 3I8S Chain:B ((1-261)) | MKKLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLVD--------LPGTYSLTTIS---SQTSLDEQIACHYILS-GDADLLINVVD--------------------ASNLER-NLYLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRG-----------------RGIEALKLAIDRYKANENVELVHY-----------AQPLLNEADSLAKVMPSDIPLKQRRWL-GLQMLE----------------------GDIYSRAYAGEASQHLDAALARLRNEMD---------DPALHIADARYQCIAAICDVVSN------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9288 for 2101 contacts (-4.4/contact) +
2D Compatibility (PS) -27743 + (NN) -10329 + (LL) 9176
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -49234.0 ( -23.43 by residue)
QMean score : 0.222
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