Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHYQTIIIGAGAAGIGFGSAMQRLGLTNFLIIEK-GHIGESFLRW-PRTTQFITPSFTTNGFGFPDLNAVIPDTSPAFSFEKEHLSGVEYARYLQLVAAHYNLPIQNETSVLSIDKRD-SLFVIKTSKGDFSADYLIMATGEFQ-NPNTIDIKGADL----GMHYGQVDNFHIKSDNPFIIIGGNESACDALTHLVYLGNQVELYTDTFGRKESNPDPSISLSPLTKERLKHIQDHKKEYYSISEGKKAIEIKQIGKQYQVTFD----DGSTAESFHKPILSTGFLNTCHLIDGIA-LFEYDKNQLPIVTEDDESTIVNNCFLIGPSLRQRDTIFCYIYKFRQRFVPVINHIAQREGIILDEDTLEFFKENQMYLDNLACCDVNCDC |
| 3LZW Chain:A ((6-314)) | -KVYDITIIGGGPVGLFTAFYGGMRQA-SVKIIESLPQLGGQLSALYPEKY-IYD--------------------VAGF----PKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYF-VDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-------------HEHSVENLHA--SKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGP--IKNWGLDIE-KNSIVVKSTME-TNIEGFFAAGDICTYEGKV-NLIASGFGEAPTAVNNAKAYMDPKARVQPLHSTSLF---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170345 for 2470 contacts (-69.0/contact) +
2D Compatibility (PS) -31155 + (NN) -3460 + (LL) 2448
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -213212.0 ( -86.32 by residue)
QMean score : 0.443
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