Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMMDANEIISFIQNSTKSTPVKVYVKGELEGINFGESAKAFINGNTGVVFGEWSEIQTAIEENQSKIEDYVVENDRRNSAIPMLDLKNIKARIEPGAIIRDQVEIGDNAVIMMGASINIGSVIGEGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVIEPPSAKPVVIEDDVVIGANAVVLEGVTVGKGAVVAAGAIVV---------------NDVEPYTVVA-GTP-----------AKKIKDIDEKTKGKTEIKQELRQL
3GOS Chain:A ((104-274))------------------------------------------------------------------------------------------GFRVVPPATVRKGAFIARNTVLMPSY-VNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQSTRIYDRETGEVHYGRVPAGSVVVSGNLPSKDGSYSLYCAVIVKKVDA------GINELLRT-


General information:
TITO was launched using:
RESULT:

Template: 3GOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 820 -147343 -179.69 -1067.70
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -179.69
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.685

(partial model without unconserved sides chains):
PDB file : Tito_3GOS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GOS-query.scw
PDB file : Tito_Scwrl_3GOS.pdb: