Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLRLVSPIKAFADGIVAVAIAVVLMFGLANTPRAVAADERLQF-TATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRA-DVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALTS
2L5O Chain:A ((1-137))
-------------------------------------DSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTY--VGEPDFGKLYQEIDTAW-
General information:
TITO was launched using:
RESULT:
Template:
2L5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92892 for 1010 contacts (-92.0/contact) +
2D Compatibility (PS) -14615 + (NN) -8377 + (LL) 3532
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -120202.0 ( -119.01 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2L5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L5O-query.scw
PDB file :
Tito_Scwrl_2L5O.pdb
: