Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSFEGKVAVITGAGSGIGRALALNLSEKRAKLALSDV-DTDGLAKTVRLAQALGAQVKSDRLDVAEREAVLAHADAVVAHFGTVHQVYNNAGIAYNGNVDKSEFKDIERIIDVDFWGVVNGTKAFLPHVIASGDGHIVNISSLFGLIAVPGQSAYNAAKFAVRGFTEALRQEMLVARHPVKVTCVHPGGIKTAVARNATVADGEDQQTFAEFFDRRLALHSPEMAAKTIVNGVAKGQARVVVGLEAKAVDVLARIMGSSYQRLVAAGVAKFFPWAK |
| 1NFQ Chain:A ((5-190)) | ---LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA----ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALEL--GPSGIRVNSIHPGLVKTPM---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74712 for 1533 contacts (-48.7/contact) +
2D Compatibility (PS) -19551 + (NN) -5233 + (LL) 7780
1D Compatibility (HY) -12400 + (ID) 3200
Total energy: -107316.0 ( -70.00 by residue)
QMean score : 0.449
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