Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLSVAPKEIAGHGLLDGKVVVVTAAAGTGIGSATARRALAEGADVVISDHHERRLGETAAELSALGLGRVEHVVCDVTSTAQVDALIDSTTARMGRLDVLVNNAGLGGQTPVADMTDDEWDRVLDVSLTSVFRATRAALRYFRDAPHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAAEYGVRINAVSPSIAR---HKFLDKTASAELLDRLAAGEAFGRAAEPWEVAATIAFLASDYSSYLTGEVISVSCQHP
3TZC Chain:B ((10-245))
---------------LEGKVALVTGAS-RGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG----MALNVTNPESIEAVLKAITDEFGGVDILVNNA---------------WSDIMETNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVG-------ANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT-----EQRTATLAQVPA----GRLGDPREIASAVAFLASPEAAYITGETLHVN----
General information:
TITO was launched using:
RESULT:
Template:
3TZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137224 for 1714 contacts (-80.1/contact) +
2D Compatibility (PS) -22647 + (NN) -4898 + (LL) 2428
1D Compatibility (HY) -12800 + (ID) 3900
Total energy: -179041.0 ( -104.46 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_3TZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZC-query.scw
PDB file :
Tito_Scwrl_3TZC.pdb
: