Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPR--VFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA
3M6P Chain:B ((1-165))
---MEIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYE
General information:
TITO was launched using:
RESULT:
Template:
3M6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69580 for 1222 contacts (-56.9/contact) +
2D Compatibility (PS) -17473 + (NN) -5938 + (LL) 556
1D Compatibility (HY) -16800 + (ID) 3100
Total energy: -112335.0 ( -91.93 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_3M6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M6P-query.scw
PDB file :
Tito_Scwrl_3M6P.pdb
: