Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPQIVILPHADHCPEGAVFEAKPGETILDAALRNGIE-IEHACEKSCACTTCHVIVREGL-DSMEPSDELEDDMLDKA-WGLEPDSRLSCQAVVAD--EDLVVEIPKYTINQVSEGH
1UWM Chain:A ((1-104))
-AKIIFIEHNGT---RHEVEAKPGLTVMEAARDNGVPGIDADCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAYEPNPATSRLTCQIKVTSLLDGLVVHLPEK---------
General information:
TITO was launched using:
RESULT:
Template:
1UWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62688 for 736 contacts (-85.2/contact) +
2D Compatibility (PS) -10959 + (NN) -4987 + (LL) 664
1D Compatibility (HY) -7200 + (ID) 1850
Total energy: -87020.0 ( -118.23 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_1UWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UWM-query.scw
PDB file :
Tito_Scwrl_1UWM.pdb
: