Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRG--QDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTG-LNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRG-EVHLDMVEVMVLDEADRMLDM-GFIPQVRQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAG-SDKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPE------DPDDYVHRIGRTGRAGASGTSISFAGED-DAFALPPIEELLGRKITCEMPPAELLKPVPRKH |
| 3FHT Chain:A ((22-399)) | -----YSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPA-------NKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNK----LERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRML--PRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253989 for 3109 contacts (-81.7/contact) +
2D Compatibility (PS) -39381 + (NN) -14701 + (LL) 1280
1D Compatibility (HY) -25600 + (ID) 6050
Total energy: -338441.0 ( -108.86 by residue)
QMean score : 0.549
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