Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPSGDQPAEPGNA
3RER Chain:F ((5-65))
----QSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPS-----------------
General information:
TITO was launched using:
RESULT:
Template:
3RER.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44347 for 374 contacts (-118.6/contact) +
2D Compatibility (PS) -6618 + (NN) -905 + (LL) 64
1D Compatibility (HY) -10400 + (ID) 2850
Total energy: -65056.0 ( -173.95 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_3RER.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RER-query.scw
PDB file :
Tito_Scwrl_3RER.pdb
: