Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGDKLLSELGYKLGRTIGEGSYSKVKVATSKKYKGTVAIKVVDRRRAPPDFVNKFLP-----RELSILRGVRHPHIVHVFEFIEVCNGKLYIVME-AAATDLLQAVQRNGRIPGVQARDLFAQIAGAVRYLHDHHLVHRDLKCENVLLSPDERR--VKLTDFGFGRQAHGYPDLSTTYCGSAAYASPEVLLGI---PYDPKKYDVWSMGVVLYVMVTGCMPFDDSDIAGLPRRQKRGVLY---PE-GLELSERCKALIAELLQFSPSARPSAGQVARNCWLRAGDSG |
| 4BDE Chain:A ((18-288)) | -----------YIMSKTL------EVKLAFERKTCKKVAIKIISK-------------ALNVETEIEILKKLNHPCIIKIKNFFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-IL--TSLMRTLCGTPTYLAPEVLVSVGTAGYN-RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151874 for 1662 contacts (-91.4/contact) +
2D Compatibility (PS) -25401 + (NN) -11383 + (LL) 480
1D Compatibility (HY) -22800 + (ID) 4250
Total energy: -215228.0 ( -129.50 by residue)
QMean score : 0.394
|
|
|