Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------MVEQKDKYRPCVGIMLFNKQGHVFIGKRFDSDSYWQMPQGGIDDGEKLEQAALRELLEEVGTDKAKIIAKNKDWIYYNLPEEVIPTCWNGRYSGQKQRWFLMKFYGEGKDININYTDHPEFKEWRWQSVDNLVAGAIPFKKEVYKTVIEEFSSQIKVSIIK---------------------------------- |
| 4ZBP Chain:A ((36-307)) | IPLLEGETDNYDGVTVTMVEPMDSEVFTESLRASLSHWREEGKKGIWIKLPLGLANLVEAAVSEGFRYHHAEPEYLMLVSWISETPDTIPANASHVVGAGALVINKNTKEVLVVQV-----WKLPTGVINEGEDIWTGVAREVEEETGII-----ADFVEVLAFRQSHKAILD-----------MFFLCVLSPRSYDIT---EQKSEILQAKWMPIQEYVDQPWNKKNEMFKFMANICQKKCEEEYLGFAIVPTTTSSGKESFIYCNADHAKRLKVSRDQAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZBP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46332 for 957 contacts (-48.4/contact) +
2D Compatibility (PS) -14182 + (NN) -3812 + (LL) 1036
1D Compatibility (HY) -7200 + (ID) 1300
Total energy: -71790.0 ( -75.02 by residue)
QMean score : 0.402
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