Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPIFAVGDVHGEITLLDELLENWDK--ERERLLFVGDLIDRGENPAAVLRRVKALADQTGAIVLKGNHEQMLLDFLENPSGKMHYYLSQGGMETIQSLIADSLDKKMTPEGLAKRVKEEASELIDFIRKLPLYYEEG--KYVFVHAGVDLTKKDWHDT-----------------EERDFFWIREP------------------------FLFG---------------------------QNKTGKVFIFGHTPVQNLHIDESSGIWVSEDKTRLDIDGGAVFGGELHGVVVEEKVITKSFSVKK |
| 2DFJ Chain:A ((2-267)) | --ATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLG--DSVRLVLGNHDLHLLAVFAGI-------SRNKPKDRLTPLLE----------------APDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEG-------K-G-TPEGIYALDTGCCWGGSLTCLRWEDKQYFVQP---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97941 for 1515 contacts (-64.6/contact) +
2D Compatibility (PS) -21144 + (NN) -10172 + (LL) 2000
1D Compatibility (HY) -12000 + (ID) 2600
Total energy: -141857.0 ( -93.63 by residue)
QMean score : 0.410
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